QMRITools`
QMRITools`

PlotTracts

PlotTracts[tracts,vox]

plots the tracts assuming an Boxratio based on vox.

PlotTracts[tracts,vox,dim]

plots the tracts assuming an Boxratio based on vox with a PlotRange spanning the full dim.

Details

  • The following options can be given:
  • MaxTracts2000MaxTracts is an option for PlotTracts. It specifies how many tracts are plotted.
    ImageSize600ImageSize is an option that specifies the overall size of an image to display for an object.
    Method"line"Method is an option for various algorithm-intensive functions that specifies what internal methods they should use.
    TractColoring"Direction"TractColoring is an option for PlotTracts and sets how the tracts are colored. Values can be "Direction", "Length", "Angle", {par}, or RGBColor[]. For "Length", "Angle", {par} it can be defined in the form {..., {min, max}} where the {min, max} specifies the range of the color function.
    ColorFunction"SouthwestColors"ColorFunction is an option for graphics functions that specifies a function to apply to determine colors of elements.
    BoxedTrueBoxed is an option for Graphics3D that specifies whether to draw the edges of the bounding box in a three‐dimensional picture.
    TractSize1TractSize is an option for PlotTracts. When tubes are used it specifies the tube withd.
    TractReduction1TractReduction is an option for PlotTracts. Value can be an Integer > 0, which determines with which facter the tract coordinates are subsampled.
    TractScaling"World"TractScaling is an option for PlotTracts. The value can be "World" or "Voxel", if the value is "Wold" the tracts are in mm else in voxel coordinates.
    PerformanceGoal"Quality"PerformanceGoal is an option for various algorithmic and presentational functions that specifies what aspect of performance to try to optimize with Automatic settings for options.

Examples