PlotSegmentedTracts

QMRITools`

QMRITools`

PlotSegmentedTracts

PlotSegmentedTracts[tracts,segments,dim,vox]

plots the tracts after segmenting each segment.

PlotSegmentedTracts[tracts,segments,bones,dim,vox]

plots the tracts after segmenting each segment also rendering a bone volume.

Details

The following options can be given:

	MaxTracts	5000	MaxTracts is an option for PlotTracts. It specifies how many tracts are plotted.
	FiberLengthRange	{20, 500}	FiberLengthRange is an option for FiberTractography and specifies the allowed tract range.
	Method	"line"	Method is an option for various algorithm-intensive functions that specifies what internal methods they should use.
	OutputForm	"All"	OutputForm[expr] prints as a two-dimensional representation of expr using only keyboard characters.
	ImageSize	400	ImageSize is an option that specifies the overall size of an image to display for an object.
	Monitor	False	Monitor[expr,mon] generates a temporary monitor cell in which the continually updated current value of mon is displayed during the course of evaluation of expr.
	TractSize	1	TractSize is an option for PlotTracts. When tubes are used it specifies the tube width.
	ColorFunction	"RomaO"	ColorFunction is an option for graphics functions that specifies a function to apply to determine colors of elements.
	PerformanceGoal	"Quality"	PerformanceGoal is an option for various algorithmic and presentational functions that specifies what aspect of performance to try to optimize with Automatic settings for options.
	ContourOpacity	0.3	ContourOpacity is an option for PlotContour and PlotSegmentations. It specifies the opacity of the contour.
	FittingOrder	3	FittingOrder is an option for FitTracts. It specifies the polynomial order of the function to fit the tract.