TractographyTools
  • Functions
    • EndpointDensityMap
    • ExportTCK
    • ExportTracts
    • FiberTractography
    • FilterTractLength
    • FilterTracts
    • FindTensorPermutation
    • FitTracts
    • GetTractValues
    • ImportTCK
    • ImportTracts
    • MoveTracts
    • PlotSegmentedTracts
    • PlotTracts
    • ResampleTracts
    • RescaleTracts
    • SeedDensityMap
    • SegmentTracts
    • TractAngle
    • TractAngleMap
    • TractCurvature
    • TractCurvatureMap
    • TractDensityMap
    • TractLength
    • TractLengthMap
    • Functions
      • EndpointDensityMap
      • ExportTCK
      • ExportTracts
      • FiberTractography
      • FilterTractLength
      • FilterTracts
      • FindTensorPermutation
      • FitTracts
      • GetTractValues
      • ImportTCK
      • ImportTracts
      • MoveTracts
      • PlotSegmentedTracts
      • PlotTracts
      • ResampleTracts
      • RescaleTracts
      • SeedDensityMap
      • SegmentTracts
      • TractAngle
      • TractAngleMap
      • TractCurvature
      • TractCurvatureMap
      • TractDensityMap
      • TractLength
      • TractLengthMap
QMRITOOLS GUIDE
  • Functions
    • EndpointDensityMap
    • ExportTCK
    • ExportTracts
    • FiberTractography
    • FilterTractLength
    • FilterTracts
    • FindTensorPermutation
    • FitTracts
    • GetTractValues
    • ImportTCK
    • ImportTracts
    • MoveTracts
    • PlotSegmentedTracts
    • PlotTracts
    • ResampleTracts
    • RescaleTracts
    • SeedDensityMap
    • SegmentTracts
    • TractAngle
    • TractAngleMap
    • TractCurvature
    • TractCurvatureMap
    • TractDensityMap
    • TractLength
    • TractLengthMap
    • Functions
      • EndpointDensityMap
      • ExportTCK
      • ExportTracts
      • FiberTractography
      • FilterTractLength
      • FilterTracts
      • FindTensorPermutation
      • FitTracts
      • GetTractValues
      • ImportTCK
      • ImportTracts
      • MoveTracts
      • PlotSegmentedTracts
      • PlotTracts
      • ResampleTracts
      • RescaleTracts
      • SeedDensityMap
      • SegmentTracts
      • TractAngle
      • TractAngleMap
      • TractCurvature
      • TractCurvatureMap
      • TractDensityMap
      • TractLength
      • TractLengthMap

TractographyTools

QMRITools package: Functions for DTI based fiber tractography.

FiberTractography — Performs fiber tractography on the tensor.

FindTensorPermutation — performs tractography for all tensor permutations and gives back the one that has the longest tracts (link).

FitTracts — Fits a tract with a polynomial function.

GetTractValues — For each tract coordinate the value in a dataset is extracted.

FilterTracts — Allows to filter tracts based on logic operators and ROIs.

ResampleTracts  ▪  MoveTracts  ▪  RescaleTracts  ▪  SegmentTracts  ▪  FilterTractLength

TractLength  ▪  TractLengthMap  ▪  TractAngle  ▪  TractAngleMap  ▪  TractCurvature  ▪  TractCurvatureMap  ▪  TractDensityMap  ▪  SeedDensityMap  ▪  EndpointDensityMap

ImportTracts  ▪  ExportTracts  ▪  PlotTracts  ▪  PlotSegmentedTracts  ▪  ExportTCK  ▪  ImportTCK